import {hero, galleryData} from "./home/js/hero.js"
import {resources} from "./home/js/resources.js"
import {playground} from "./home/js/playground.js"
import {ecosystem} from "./home/js/ecosystem.js"
import {literature} from "./home/js/literature.js"
L = FileAttachment("home/literature.json").json()
gallery = galleryData()Get started
A learning path for network models
EpiModel supports several model classes, but its distinctive contribution is stochastic network models built on temporal exponential random graph models (ERGMs). This path is for people who want to build network-based epidemic models with it.
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1Beginning
- Intro to EpiModel vignette
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The core functions:
netest,netdx, andnetsim - The Journal of Statistical Software methods paper
- NME course, NME-I: Foundations
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2Intermediate
- NME course, NME-II: Applications
- EpiModel Gallery: worked examples and model templates, in the order they build on each other
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3Advanced
- Package vignettes on parameters, network objects, and attributes
- EpiModelHPC and slurmworkflow for running models on a cluster
- The EpiModelHIV and EpiModelCOVID research packages
Get help
Ask questions and report bugs on GitHub.
Cite EpiModel
Jenness SM, Goodreau SM, Morris M. EpiModel: An R Package for Mathematical Modeling of Infectious Disease over Networks. Journal of Statistical Software. 2018; 84(8): 1-47. DOI
Who we are
EpiModel is developed by the EpiModel Research Lab at Emory University with collaborators at the University of Washington. The project page lists our funding.